Automated accounting for retailers using Shopify POS

Bookkeep connects Shopify POS to your accounting system and automates daily sales entries, fulfillment-based revenue recognition, deposit reconciliation, and full sales tax compliance — all by location, store, or franchise.

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Trusted by top ecommerce and retail Shopify brands

Shopify POS accounting without the manual cleanup

Automated Shopify POS journal entries

Accrual-based, summary journal entries posted daily to QuickBooks, Xero, NetSuite, or Sage Intacct.

Posts daily summaries — not hundreds of individual receipts

Reflects sales, returns, taxes, and tips automatically

Eliminates manual entry errors across locations

Revenue by location

Track and book revenue, COGS, and payments by store location — clean, auditable, and accurate.

Automates revenue separation across locations

Supports granular cost tracking per store

Improves visibility into store-level performance

Multi-Store Reporting

Easily separate and report on financials across multiple Shopify POS locations or retail entities.

Automates reporting by location or entity

Enables P&L roll-ups or splits as needed

Aligns perfectly with your organizational structure

Integrated sales tax support

Track and file sales tax by jurisdiction based on Shopify POS settings — no spreadsheets needed.

Calculates and books tax at the time of sale

Automates jurisdiction-level filings

Syncs with your accounting platform for audit readiness

How retail accounting automation works

Shopify Bookkeep Demo

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PRODUCT TOUR

Experience Bookkeep for Shopify

Choose your tour or close this window and click around.

1

Standard Features Tour

The most used features for Shopify merchants.

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2

Fulfillment Revenue Recognition

Larger businesses might require booking revenue by fulfillment date.

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3

How to get started.

Learn how to connect Shopify and your accounting platform to Bookkeep.

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4

Split Payouts for POS

Need to automatically transfer funds for each POS location?

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Storylane is a platform for creating and sharing interactive demos. Welcome to the future of interactive demos.

Watch how Bookkeep automates Shopify  journal entries, Revenue recognition and Payout splitting.

See Interactive Demo

See Interactive Demo

Support your merchants with smarter financial workflows

If you’re a Shopify agency or implementation partner, Bookkeep helps your merchants automate their sales data, deposits, and tax — and saves you time during onboarding and ongoing support.

Partner with Us

Work at Shopify? Help your merchants automate their accounting

If you're on Shopify's sales, success, or partnerships team, Bookkeep is the financial automation platform your merchants have been asking for. We automate journal entries, sales tax, and payout reconciliation — so your merchants stay happy and scale faster.

Contact Us

Multi-bank settlement for Shopify

Split and transfer payouts by location, automatically

Bookkeep automates payout splitting across bank accounts by store, franchise, or fulfillment location—and transfers funds accordingly. Franchise fees? We collect those too.

Explore Payout Splitting

Sales tax done for you

Bookkeep calculates, files, and remits sales tax based on your Shopify POS settings — for every state and jurisdiction. Stay compliant without downloading reports or logging into tax portals.

Explore Sales Tax Automation

What Shopify merchants are saying

See how Bookkeep provides financial clarity for leading Shopify brands.

Read Case Studies

“With Bookkeep, we finally found a reliable and efficient solution to connect Shopify and QuickBooks. Managing the accounting for our franchise network is now streamlined and secure. Today, we have the peace of mind that every transaction is perfectly reconciled and that every cent is properly distributed to our franchisees. Bookkeep has become an essential partner for Shop Santé, and we highly recommend their services to any business looking for accurate and efficient accounting automation.”

Eric Fortier

Founder

“The closing process has gotten so much more simple because of Bookkeep. We now have real-time numbers that I’m confident are right, giving us the ability to do a lot more higher-level analysis, which is better decision-making for the business.”

Brian Thalman

Financial Controller

“I now can take a breath and focus on streamlining procedures, think about the culture I want my company to have, and focus on clients that are better matched for my process… I am now more focused on HR, marketing, and growth. I spend more time on my own company’s financials, which I NEVER did… I also meet with peers, partners, and potential clients in meetings throughout the day, in addition to webinars that I like to participate in.”

Rachel Dauchy

Owner

“One of the things I really love about Bookkeep is its compliance area. I can find everything quickly and can see exactly how the entries are calculated and booked, since it’s linked to platforms like Square or Shopify. I have no worries if there is ever an audit… No one else does this. Bookkeep works so well, I forget I’m using it!”

Sherri-Lee Mathers

CPB, AIA

Eric Fortier

Founder

Brian Thalman

Financial Controller

Rachel Dauchy

Owner

Sherri-Lee Mathers

CPB, AIA

Eric Fortier

Founder

Brian Thalman

Financial Controller

Rachel Dauchy

Owner

Sherri-Lee Mathers

CPB, AIA

Eric Fortier

Founder

Brian Thalman

Financial Controller

Rachel Dauchy

Owner

Sherri-Lee Mathers

CPB, AIA

Eric Fortier

Founder

Brian Thalman

Financial Controller

Rachel Dauchy

Owner

Sherri-Lee Mathers

CPB, AIA

Eric Fortier

Founder

Brian Thalman

Financial Controller

Rachel Dauchy

Owner

Sherri-Lee Mathers

CPB, AIA

Eric Fortier

Founder

Brian Thalman

Financial Controller

Rachel Dauchy

Owner

Sherri-Lee Mathers

CPB, AIA

Eric Fortier

Founder

Brian Thalman

Financial Controller

Rachel Dauchy

Owner

Sherri-Lee Mathers

CPB, AIA

Eric Fortier

Founder

Brian Thalman

Financial Controller

Rachel Dauchy

Owner

Sherri-Lee Mathers

CPB, AIA

Eric Fortier

Founder

Brian Thalman

Financial Controller

Rachel Dauchy

Owner

Sherri-Lee Mathers

CPB, AIA

“I would just simply recommend Bookkeep because of the confidence that it gives when your transactions are posted and it tells me to expect a payment and then the payment comes in that, that boosts my confidence. I’ve never been able to reconcile the clearing accounts and I would like to be able to do that and we’re closer now than we’ve ever been.”

Forrest Allen

Head of Accounting

“All of my e-commerce clients are now on Bookkeep. Bookkeep allows me to provide transparent reports that match the sales platforms on a daily basis. It allows me the opportunity to move forward at a better speed, growing my business efficiently.”

Maureen Stevens

Founder

“Bookkeep has saved me hours of time dealing with our clients accepting payments from Square, Shopify, Amazon, etc. This application allows us to even grab historical data as we are wrapping up client books for tax prep. The support is superior. This is a must have tool for every accounting professional.”

Dawn Brolin

CPA, CFE, Owner

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“My time is worth something. The free time Bookkeep is giving me is more than worth it. By saving a lot of hours each month with Bookkeep, I can work on important things. It’s an investment, not an expense.”

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner

Forrest Allen

Head of Accounting

Maureen Stevens

Founder

Dawn Brolin

CPA, CFE, Owner

%201.avif)

Chip Adkins

Chef/Owner